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[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 278 gene sets)
  • C2 (curated gene sets, 6290 gene sets)
    • CGP (chemical and genetic perturbations, 3368 gene sets)
    • CP (canonical pathways, 2922 gene sets)
  • C3 (regulatory target gene sets, 3731 gene sets)
    • MIR (microRNA targets, 2598 gene sets)
    • TFT (all transcription factor targets, 1133 gene sets)
      • TFT:GTRD (GTRD transcription factor targets, 523 gene sets)
      • TFT:TFT_Legacy (legacy transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (ontology gene sets, 14998 gene sets)
    • GO (Gene Ontology, 10185 gene sets)
      • GO:BP (GO biological process, 7481 gene sets)
      • GO:CC (GO cellular component, 996 gene sets)
      • GO:MF (GO molecular function, 1708 gene sets)
    • HPO (Human Phenotye Ontology, 4813 gene sets)
  • C6 (oncogenic signature gene sets, 189 gene sets)
  • C7 (immunologic signature gene sets, 5219 gene sets)
    • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
    • VAX (vaccine response gene sets, 347 gene sets)
  • C8 (cell type signature gene sets, 671 gene sets)

Gene sets starting with Z

Click on a gene set name to view its gene set page.

ZA_UNIPROT_Q9UM89_UNREVIEWED_TARGET
_GENES

ZAIDI_OSTEOBLAST_TRANSCRIPTION_FACT
ORS

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_1DY_ADDNL_EXON_LVL_UP

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_1DY_DN

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_1DY_UP

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_3DY_DN

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_3DY_UP

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_AD5_NAB_TITERS_GT_200_VS
_LTE_200_1DY_DN

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_AD5_NAB_TITERS_GTE_200_V
S_LTE_200_1DY_UP

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_CORRELATED_WITH_CD8_T_CE
LL_RESPONSE_3DY_NEGATIVE

ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_A
GE_20_50YO_CORRELATED_WITH_CD8_T_CE
LL_RESPONSE_3DY_POSITIVE

ZAMORA_NOS2_TARGETS_DN
ZAMORA_NOS2_TARGETS_UP
ZBED4_TARGET_GENES
ZBED5_TARGET_GENES
ZBTB12_TARGET_GENES
ZBTB18_TARGET_GENES
ZBTB1_TARGET_GENES
ZBTB24_TARGET_GENES
ZBTB44_TARGET_GENES
ZBTB49_TARGET_GENES
ZBTB5_TARGET_GENES
ZBTB7B_TARGET_GENES
ZC3H11A_TARGET_GENES
ZEILSTRA_CD44_TARGETS_DN
ZEILSTRA_CD44_TARGETS_UP
ZEMBUTSU_SENSITIVITY_TO_CYCLOPHOSPH
AMIDE

ZEMBUTSU_SENSITIVITY_TO_METHOTREXAT
E

ZERBINI_RESPONSE_TO_SULINDAC_DN
ZERBINI_RESPONSE_TO_SULINDAC_UP
ZF5_01
ZF5_B
ZFHX3_TARGET_GENES
ZFP28_TARGET_GENES
ZFP36L1_TARGET_GENES
ZFP37_TARGET_GENES
ZFP3_TARGET_GENES
ZFP82_TARGET_GENES
ZFP91_TARGET_GENES
ZHAN_EARLY_DIFFERENTIATION_GENES_DN
ZHAN_EARLY_DIFFERENTIATION_GENES_UP
ZHAN_LATE_DIFFERENTIATION_GENES_DN
ZHAN_LATE_DIFFERENTIATION_GENES_UP
ZHAN_MULTIPLE_MYELOMA_CD1_AND_CD2_D
N

ZHAN_MULTIPLE_MYELOMA_CD1_AND_CD2_U
P

ZHAN_MULTIPLE_MYELOMA_CD1_DN
ZHAN_MULTIPLE_MYELOMA_CD1_UP
ZHAN_MULTIPLE_MYELOMA_CD1_VS_CD2_DN
ZHAN_MULTIPLE_MYELOMA_CD1_VS_CD2_UP
ZHAN_MULTIPLE_MYELOMA_CD2_DN
ZHAN_MULTIPLE_MYELOMA_CD2_UP
ZHAN_MULTIPLE_MYELOMA_DN
ZHAN_MULTIPLE_MYELOMA_HP_DN
ZHAN_MULTIPLE_MYELOMA_HP_UP
ZHAN_MULTIPLE_MYELOMA_LB_DN
ZHAN_MULTIPLE_MYELOMA_LB_UP
ZHAN_MULTIPLE_MYELOMA_MF_DN
ZHAN_MULTIPLE_MYELOMA_MF_UP
ZHAN_MULTIPLE_MYELOMA_MS_DN
ZHAN_MULTIPLE_MYELOMA_MS_UP
ZHAN_MULTIPLE_MYELOMA_PR_DN
ZHAN_MULTIPLE_MYELOMA_PR_UP
ZHAN_MULTIPLE_MYELOMA_SPIKED
ZHAN_MULTIPLE_MYELOMA_SUBGROUPS
ZHAN_MULTIPLE_MYELOMA_UP
ZHAN_V1_LATE_DIFFERENTIATION_GENES_
DN

ZHAN_V1_LATE_DIFFERENTIATION_GENES_
UP

ZHAN_V2_LATE_DIFFERENTIATION_GENES
ZHAN_VARIABLE_EARLY_DIFFERENTIATION
_GENES_DN

ZHAN_VARIABLE_EARLY_DIFFERENTIATION
_GENES_UP

ZHANG_ADIPOGENESIS_BY_BMP7
ZHANG_ANTIVIRAL_RESPONSE_TO_RIBAVIR
IN_DN

ZHANG_ANTIVIRAL_RESPONSE_TO_RIBAVIR
IN_UP

ZHANG_BREAST_CANCER_PROGENITORS_DN
ZHANG_BREAST_CANCER_PROGENITORS_UP
ZHANG_GATA6_TARGETS_DN
ZHANG_GATA6_TARGETS_UP
ZHANG_INTERFERON_RESPONSE
ZHANG_PROLIFERATING_VS_QUIESCENT
ZHANG_RESPONSE_TO_CANTHARIDIN_DN
ZHANG_RESPONSE_TO_CANTHARIDIN_UP
ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND
_TNF_DN

ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND
_TNF_UP

ZHANG_TARGETS_OF_EWSR1_FLI1_FUSION
ZHANG_TLX_TARGETS_36HR_DN
ZHANG_TLX_TARGETS_36HR_UP
ZHANG_TLX_TARGETS_60HR_DN
ZHANG_TLX_TARGETS_60HR_UP
ZHANG_TLX_TARGETS_DN
ZHANG_TLX_TARGETS_UP
ZHENG_BOUND_BY_FOXP3
ZHENG_CORD_BLOOD_C10_MULTILYMPHOID_
PROGENITOR

ZHENG_CORD_BLOOD_C1_PUTATIVE_MEGAKA
RYOCYTE_PROGENITOR

ZHENG_CORD_BLOOD_C2_PUTATIVE_BASOPH
IL_EOSINOPHIL_MAST_CELL_PROGENITOR

ZHENG_CORD_BLOOD_C3_MEGAKARYOCYTE_E
RYTHROID_PROGENITOR

ZHENG_CORD_BLOOD_C4_PUTATIVE_EARLY_
ERYTHROID_COMMITMENT

ZHENG_CORD_BLOOD_C5_SIMILAR_TO_HSC_
C6_PUTATIVE_ALTERED_METABOLIC_STATE

ZHENG_CORD_BLOOD_C6_HSC_MULTIPOTENT
_PROGENITOR

ZHENG_CORD_BLOOD_C7_PUTATIVE_LYMPHO
ID_PRIMED_MULTIPOTENT_PROGENITOR_1

ZHENG_CORD_BLOOD_C8_PUTATIVE_LYMPHO
ID_PRIMED_MULTIPOTENT_PROGENITOR_2

ZHENG_CORD_BLOOD_C9_GRANULOCYTE_MAC
ROPHAGE_PROGENITOR

ZHENG_FOXP3_TARGETS_DN
ZHENG_FOXP3_TARGETS_IN_T_LYMPHOCYTE
_DN

ZHENG_FOXP3_TARGETS_IN_T_LYMPHOCYTE
_UP

ZHENG_FOXP3_TARGETS_IN_THYMUS_DN
ZHENG_FOXP3_TARGETS_IN_THYMUS_UP
ZHENG_FOXP3_TARGETS_UP
ZHENG_GLIOBLASTOMA_PLASTICITY_DN
ZHENG_GLIOBLASTOMA_PLASTICITY_UP
ZHENG_IL22_SIGNALING_DN
ZHENG_IL22_SIGNALING_UP
ZHENG_RESPONSE_TO_ARSENITE_DN
ZHENG_RESPONSE_TO_ARSENITE_UP
ZHONG_PFC_C1_ASTROCYTE
ZHONG_PFC_C1_DLX5_POS_INTERNEURON
ZHONG_PFC_C1_MICROGLIA
ZHONG_PFC_C1_NEUROD1_POS_EXCITATORY
_NEURON

ZHONG_PFC_C1_OPC
ZHONG_PFC_C2_ASCL1_POS_ASTROCYTE
ZHONG_PFC_C2_SOX5_BCL11B_POS_EXCITA
TORY_NEURON

ZHONG_PFC_C2_THY1_POS_OPC
ZHONG_PFC_C2_UNKNOWN_NPC
ZHONG_PFC_C3_ASTROCYTE
ZHONG_PFC_C3_HOPX_POS_OPC
ZHONG_PFC_C3_MICROGLIA
ZHONG_PFC_C3_PROX1_CCK_POS_INTERNEU
RON

ZHONG_PFC_C3_UNKNOWN_INP
ZHONG_PFC_C4_PTGDS_POS_OPC
ZHONG_PFC_C4_UNKNOWN_INP
ZHONG_PFC_C5_BCL11B_CALB2_POS_INP
ZHONG_PFC_C6_DLX5_GAD1_GAD2_POS_INT
ERNEURON

ZHONG_PFC_C6_PLXNA4_POS_EXCITATORY_
NEURON

ZHONG_PFC_C7_ORG_UNDERGOING_NEURONA
L_DIFFERENTIATION

ZHONG_PFC_C7_SST_LHX6_POS_PUTATIVE_
MIGRATING_INTERNEURON

ZHONG_PFC_C8_ORG_PROLIFERATING
ZHONG_PFC_C8_UNKNOWN_NEUROD2_POS_IN
TERNEURON

ZHONG_PFC_C9_ORG_OTHER
ZHONG_PFC_HES1_POS_C1_NPC
ZHONG_PFC_MAJOR_TYPES_ASTROCYTES
ZHONG_PFC_MAJOR_TYPES_EXCITATORY_NE
URON

ZHONG_PFC_MAJOR_TYPES_INTERNEURON
ZHONG_PFC_MAJOR_TYPES_MICROGLIA
ZHONG_PFC_MAJOR_TYPES_NPCS
ZHONG_PFC_MAJOR_TYPES_OPC
ZHONG_RESPONSE_TO_AZACITIDINE_AND_T
SA_DN

ZHONG_RESPONSE_TO_AZACITIDINE_AND_T
SA_UP

ZHONG_SECRETOME_OF_LUNG_CANCER_AND_
ENDOTHELIUM

ZHONG_SECRETOME_OF_LUNG_CANCER_AND_
FIBROBLAST

ZHONG_SECRETOME_OF_LUNG_CANCER_AND_
MACROPHAGE

ZHOU_CELL_CYCLE_GENES_IN_IR_RESPONS
E_24HR

ZHOU_CELL_CYCLE_GENES_IN_IR_RESPONS
E_2HR

ZHOU_CELL_CYCLE_GENES_IN_IR_RESPONS
E_6HR

ZHOU_INFLAMMATORY_RESPONSE_FIMA_DN
ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP
ZHOU_INFLAMMATORY_RESPONSE_LIVE_DN
ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP
ZHOU_INFLAMMATORY_RESPONSE_LPS_UP
ZHOU_PANCREATIC_BETA_CELL
ZHOU_PANCREATIC_ENDOCRINE_PROGENITO
R

ZHOU_PANCREATIC_EXOCRINE_PROGENITOR
ZHOU_TNF_SIGNALING_30MIN
ZHOU_TNF_SIGNALING_4HR
ZHU_CMV_24_HR_DN
ZHU_CMV_24_HR_UP
ZHU_CMV_8_HR_DN
ZHU_CMV_8_HR_UP
ZHU_CMV_ALL_DN
ZHU_CMV_ALL_UP
ZHU_SKIL_TARGETS_DN
ZHU_SKIL_TARGETS_UP
ZIC1_01
ZIC2_01
ZIC3_01
ZID_01
ZIM3_TARGET_GENES
ZIRN_TRETINOIN_RESPONSE_DN
ZIRN_TRETINOIN_RESPONSE_UP
ZIRN_TRETINOIN_RESPONSE_WT1_DN
ZIRN_TRETINOIN_RESPONSE_WT1_UP
ZMYM2_TARGET_GENES
ZMYND11_TARGET_GENES
ZNF101_TARGET_GENES
ZNF10_TARGET_GENES
ZNF112_TARGET_GENES
ZNF133_TARGET_GENES
ZNF134_TARGET_GENES
ZNF136_TARGET_GENES
ZNF140_TARGET_GENES
ZNF146_TARGET_GENES
ZNF157_TARGET_GENES
ZNF165_TARGET_GENES
ZNF169_TARGET_GENES
ZNF16_TARGET_GENES
ZNF175_TARGET_GENES
ZNF184_TARGET_GENES
ZNF197_TARGET_GENES
ZNF19_TARGET_GENES
ZNF202_TARGET_GENES
ZNF20_TARGET_GENES
ZNF211_TARGET_GENES
ZNF213_TARGET_GENES
ZNF214_TARGET_GENES
ZNF223_TARGET_GENES
ZNF224_TARGET_GENES
ZNF22_TARGET_GENES
ZNF236_TARGET_GENES
ZNF239_TARGET_GENES
ZNF23_TARGET_GENES
ZNF250_TARGET_GENES
ZNF257_TARGET_GENES
ZNF260_TARGET_GENES
ZNF26_TARGET_GENES
ZNF274_TARGET_GENES
ZNF282_TARGET_GENES
ZNF292_TARGET_GENES
ZNF2_TARGET_GENES
ZNF302_TARGET_GENES
ZNF30_TARGET_GENES
ZNF318_TARGET_GENES
ZNF322_TARGET_GENES
ZNF329_TARGET_GENES
ZNF331_TARGET_GENES
ZNF33A_TARGET_GENES
ZNF34_TARGET_GENES
ZNF350_TARGET_GENES
ZNF354A_TARGET_GENES
ZNF354B_TARGET_GENES
ZNF354C_TARGET_GENES
ZNF362_TARGET_GENES
ZNF37A_TARGET_GENES
ZNF391_TARGET_GENES
ZNF394_TARGET_GENES
ZNF404_TARGET_GENES
ZNF407_TARGET_GENES
ZNF410_TARGET_GENES
ZNF416_TARGET_GENES
ZNF418_TARGET_GENES
ZNF419_TARGET_GENES
ZNF41_TARGET_GENES
ZNF423_TARGET_GENES
ZNF426_TARGET_GENES
ZNF433_TARGET_GENES
ZNF436_TARGET_GENES
ZNF445_TARGET_GENES
ZNF449_TARGET_GENES
ZNF454_TARGET_GENES
ZNF486_TARGET_GENES
ZNF488_TARGET_GENES
ZNF490_TARGET_GENES
ZNF491_TARGET_GENES
ZNF501_TARGET_GENES
ZNF502_TARGET_GENES
ZNF507_TARGET_GENES
ZNF510_TARGET_GENES
ZNF512_TARGET_GENES
ZNF512B_TARGET_GENES
ZNF513_TARGET_GENES
ZNF514_TARGET_GENES
ZNF524_TARGET_GENES
ZNF528_TARGET_GENES
ZNF529_TARGET_GENES
ZNF530_TARGET_GENES
ZNF532_TARGET_GENES
ZNF547_TARGET_GENES
ZNF548_TARGET_GENES
ZNF549_TARGET_GENES
ZNF555_TARGET_GENES
ZNF558_TARGET_GENES
ZNF560_TARGET_GENES
ZNF561_TARGET_GENES
ZNF563_TARGET_GENES
ZNF577_TARGET_GENES
ZNF579_TARGET_GENES
ZNF581_TARGET_GENES
ZNF582_TARGET_GENES
ZNF584_TARGET_GENES
ZNF585B_TARGET_GENES
ZNF586_TARGET_GENES
ZNF589_TARGET_GENES
ZNF592_TARGET_GENES
ZNF595_TARGET_GENES
ZNF596_TARGET_GENES
ZNF597_TARGET_GENES
ZNF610_TARGET_GENES
ZNF618_TARGET_GENES
ZNF622_TARGET_GENES
ZNF623_TARGET_GENES
ZNF626_TARGET_GENES
ZNF654_TARGET_GENES
ZNF660_TARGET_GENES
ZNF664_TARGET_GENES
ZNF667_TARGET_GENES
ZNF669_TARGET_GENES
ZNF677_TARGET_GENES
ZNF680_TARGET_GENES
ZNF697_TARGET_GENES
ZNF704_TARGET_GENES
ZNF707_TARGET_GENES
ZNF708_TARGET_GENES
ZNF711_TARGET_GENES
ZNF740_TARGET_GENES
ZNF746_TARGET_GENES
ZNF766_TARGET_GENES
ZNF768_TARGET_GENES
ZNF774_TARGET_GENES
ZNF776_TARGET_GENES
ZNF777_TARGET_GENES
ZNF781_TARGET_GENES
ZNF784_TARGET_GENES
ZNF791_TARGET_GENES
ZNF7_TARGET_GENES
ZNF816_TARGET_GENES
ZNF830_TARGET_GENES
ZNF837_TARGET_GENES
ZNF843_TARGET_GENES
ZNF84_TARGET_GENES
ZNF85_TARGET_GENES
ZNF8_TARGET_GENES
ZNF92_TARGET_GENES
ZSCAN18_TARGET_GENES
ZSCAN21_TARGET_GENES
ZSCAN23_TARGET_GENES
ZSCAN26_TARGET_GENES
ZSCAN29_TARGET_GENES
ZSCAN2_TARGET_GENES
ZSCAN30_TARGET_GENES
ZSCAN31_TARGET_GENES
ZSCAN4_TARGET_GENES
ZSCAN5B_TARGET_GENES
ZSCAN5C_TARGET_GENES
ZSCAN5DP_TARGET_GENES
ZUCCHI_METASTASIS_DN
ZUCCHI_METASTASIS_UP
ZWANG_CLASS_1_TRANSIENTLY_INDUCED_B
Y_EGF

ZWANG_CLASS_2_TRANSIENTLY_INDUCED_B
Y_EGF

ZWANG_CLASS_3_TRANSIENTLY_INDUCED_B
Y_EGF

ZWANG_DOWN_BY_2ND_EGF_PULSE
ZWANG_EGF_INTERVAL_DN
ZWANG_EGF_INTERVAL_UP
ZWANG_EGF_PERSISTENTLY_DN
ZWANG_EGF_PERSISTENTLY_UP
ZWANG_TRANSIENTLY_UP_BY_1ST_EGF_PUL
SE_ONLY

ZWANG_TRANSIENTLY_UP_BY_2ND_EGF_PUL
SE_ONLY

ZZZ3_TARGET_GENES